Publikationen

Octoplus Qplex

Normann N. (2021) Pathogen-specific antibody signatures in patients with bacterial sepsis. Universität Greifswald, Mathematisch-Naturwissenschaftliche Fakultät. Dissertation.

Mengoni, M, Braun, AD, Gaffal, E, Tüting, T. The aryl hydrocarbon receptor promotes inflammation‐induced dedifferentiation and systemic metastatic spread of melanoma cells. Int. J. Cancer. 2020; 1– 12. https://doi.org/10.1002/ijc.33252

Paarmann K, Prakash SR, Krohn M, et al. French maritime pine bark treatment decelerates plaque development and improves spatial memory in Alzheimer’s disease mice. Phytomedicine. 2019;57:39-48. doi:10.1016/j.phymed.2018.11.033

Kliewe, F., Kaling, S., Lötzsch, H., Artelt, N., Schindler, M., Rogge, H., Schröder, S., Scharf, C., Amann, K., Daniel, C., Lindenmeyer, M.T., Cohen, C.D., Endlich, K. and Endlich, N. (2019), Fibronectin is up‐regulated in podocytes by mechanical stress. The FASEB Journal, 33: 14450-14460. doi:10.1096/fj.201900978RR

Frede K, Schreiner M, Baldermann S. Light quality-induced changes of carotenoid composition in pak choi Brassica rapa ssp. Chinensis. Journal of Photochemistry and Photobiology B: Biology 2019; 193: 18-30. https://doi.org/10.1016/j.jphotobiol.2019.02.001

Chilcutt NL. Emblica officinalis as a therapeutic supplement in Alzheimer’s disease. Thesis for the Master’s degree in Molecular Biosciences. University of Oslo, June 2019.

Shridhar N (2019). Novel vaccination strategies forCD4+ T cell immunotherapy of melanoma. Dissertation.

Witzel K, Abu Risha M, Albers P, Börnke F, Hanschen FS. Identification and Characterization of Three Epithiospecifier Protein Isoforms in Brassica oleracea. Front Plant Sci. 2019;10:1552. Published 2019 Dec 19. doi:10.3389/fpls.2019.01552

Krohn M, Wanek T, Menet MC, et al. Humanization of the Blood-Brain Barrier Transporter ABCB1 in Mice Disrupts Genomic Locus – Lessons from Three Unsuccessful Approaches. Eur J Microbiol Immunol (Bp). 2018;8(3):78-86. Published 2018 Jul 6. doi:10.1556/1886.2018.00008

Genzel, F., Franken, P., Witzel, K. and Grosch, R. (2018), Systemic induction of salicylic acid‐related plant defences in potato in response to Rhizoctonia solani AG 3PT . Plant Pathol, 67: 337-348. doi:10.1111/ppa.12746

Witzel K, Üstün S, Schreiner M, Grosch R, Börnke F, Ruppel S. A Proteomic Approach Suggests Unbalanced Proteasome Functioning Induced by the Growth-Promoting Bacterium Kosakonia radicincitans in Arabidopsis. Front Plant Sci. 2017;8:661. doi:10.3389/fpls.2017.00661

Witzel K, Buhtz A, Grosch R. Temporal impact of the vascular wilt pathogen Verticillium dahliae on tomato root proteome. Journal of Proteomics. 2017; 169: 215-224. https://doi.org/10.1016/j.jprot.2017.04.008.

Genzel F (2017). The molecular basis of the plant-pathogen interaction of potato and Rhizoctonia solani. Dissertation.

Faden F, Eschen-Lippold L, Dissmeyer N. Normalized Quantitative Western Blotting Based on Standardized Fluorescent Labeling. Methods Mol Biol. 2016;1450:247-258. doi:10.1007/978-1-4939-3759-2_20

Smart Protein Layers

Eggers B, Schork K, Turewicz M, Barkovits K, Eisenacher M, Schröder R, Clemen CS, Marcus K. Advanced Fiber Type-Specific Protein Profiles Derived from Adult Murine Skeletal Muscle. Proteomes. 2021; 9(2):28. https://doi.org/10.3390/proteomes9020028

Barkovits K., Pfeiffer K., Eggers B., Marcus K. (2021) Protein Quantification Using the “Rapid Western Blot” Approach. In: Marcus K., Eisenacher M., Sitek B. (eds) Quantitative Methods in Proteomics. Methods in Molecular Biology, vol 2228. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-1024-4_3

Dahl N, Albrecht E, Dannenberger D, Uken KL, Hammon HM, Maak S. Consequences of Maternal Essential Fatty Acid and Conjugated Linoleic Acid Supplementation on the Development of Calf Muscle and Adipose Tissue. Animals. 2020; 10(9):1598.

Kliewe, F., Kaling, S., Lötzsch, H., Artelt, N., Schindler, M., Rogge, H., Schröder, S., Scharf, C., Amann, K., Daniel, C., Lindenmeyer, M.T., Cohen, C.D., Endlich, K. and Endlich, N. (2019), Fibronectin is up‐regulated in podocytes by mechanical stress. The FASEB Journal, 33: 14450-14460. doi:10.1096/fj.201900978RR

Fingas, F., Volke, D., Hassert, R. et al. Sensitive and immunogen-specific serological detection of Rodentibacter pneumotropicus infections in mice. BMC Microbiol 19, 43 (2019). https://doi.org/10.1186/s12866-019-1417-7

Liu Y, Albrecht E, Dannenberger D, et al. Retinol binding protein 4 abundance in plasma and tissues is related to body fat deposition in cattle. Sci Rep. 2019;9(1):8056. Published 2019 May 30. doi:10.1038/s41598-019-44509-4

Schmidt H, Vlaic S, Krüger T, et al. Proteomics of Aspergillus fumigatus Conidia-containing Phagolysosomes Identifies Processes Governing Immune Evasion. Mol Cell Proteomics. 2018;17(6):1084-1096. doi:10.1074/mcp.RA117.000069

Faden F., Eschen-Lippold L., Dismeyer N. (2016) Normalized Quantitative Western Blotting Based on Standardized Fluorescent Labeling. Methods Mol Biol. 1450:247-58.

Chen J (2015). Molecularly Imprinted Polymers for the Analysis of Protein Phosphorylation and the Role of HtrA2/Omi Protein in Parkinson’s Disease. Dissertation. Ruhr-Universität Bochum, Germany.

Saturn-2D

Weiland F, Lokman NA, Klingler-Hoffmann M, et al. Ovarian Blood Sampling Identifies Junction Plakoglobin as a Novel Biomarker of Early Ovarian Cancer. Front Oncol. 2020;10:1767. doi:10.3389/fonc.2020.01767

Kratochwill K, Boehm M, Herzog R, et al. Addition of Alanyl-Glutamine to Dialysis Fluid Restores Peritoneal Cellular Stress Responses – A First-In-Man Trial. PLoS One. 2016;11(10):e0165045. Published 2016 Oct 21. doi:10.1371/journal.pone.0165045

Hecht AM, Braun BC, Krause E, Voigt CC, Greenwood AD, Czirják GÁ. Plasma proteomic analysis of active and torpid greater mouse-eared bats (Myotis myotis). Sci Rep. 2015;5:16604. Published 2015 Nov 20. doi:10.1038/srep16604

Saturn-2D REDOX

Majewska, A.M. and Mostek, A. (2021), Gel-based fluorescent proteomic tools for investigating cell redox signaling. A mini-review. ELECTROPHORESIS, 42: 1378-1387. https://doi.org/10.1002/elps.202000389

Mostek A, Janta A, Majewska A, Ciereszko A. Bull Sperm Capacitation Is Accompanied by Redox Modifications of Proteins. International Journal of Molecular Sciences. 2021; 22(15):7903. https://doi.org/10.3390/ijms22157903

Rahn J (2019). Untersuchungen zum Einfluss verschiedener Selenverbindungen auf das Proteom von murinem Kolongewebe mittels 2D-Gelelektrophorese. Dissertation.

Kratochwill K, Bender TO, Lichtenauer AM, et al. Cross-omics comparison of stress responses in mesothelial cells exposed to heat- versus filter-sterilized peritoneal dialysis fluids. Biomed Res Int. 2015;2015:628158. doi:10.1155/2015/628158

Bohler, J. Vangronsveld, A. Cuypers. 2D DiGE coupled with dual thiol-staining and metallomics reveals proteins targeted by Cd induced oxidative stress Arabidopsis thaliana. Poster presentation at Phytotechnologies 2012, 11th-14th September 2012, Hasselt, Belgium.

Refraction-2D

Chlebicka K, Bonar E, Suder P, Ostyn E, Felden B, Wladyka B, Pinel-Marie M-L. Impacts of the Type I Toxin–Antitoxin System, SprG1/SprF1, on Staphylococcus aureus Gene Expression. Genes. 2021; 12(5):770. https://doi.org/10.3390/genes12050770

Dudek B, Warskulat A-C, Vogel H, Wielsch N, Menezes RC, Hupfer Y, Paetz C, Gebauer-Jung S, Svatoš A, Schneider B. An Integrated—Omics/Chemistry Approach Unravels Enzymatic and Spontaneous Steps to Form Flavoalkaloidal Nudicaulin Pigments in Flowers of Papaver nudicaule L. International Journal of Molecular Sciences. 2021; 22(8):4129. https://doi.org/10.3390/ijms22084129

Normann N. (2021) Pathogen-specific antibody signatures in patients with bacterial sepsis. Universität Greifswald, Mathematisch-Naturwissenschaftliche Fakultät. Dissertation.

Jappe U, Karstedt A, Warneke D, Hellmig S, Böttger M, Riffelmann FW, Treudler R, Lange L, Abraham S, Dölle-Bierke S, Worm M, Wagner N, Ruëff F, Reese G, Knulst AC, Becker W-M. Identification and Purification of Novel Low-Molecular-Weight Lupine Allergens as Components for Personalized Diagnostics. Nutrients. 2021; 13(2):409. https://doi.org/10.3390/nu13020409

Herzog R, Wagner A, Wrettos G, Stampf K, Bromberger S, Sperl E, Kratochwill K. Improved Alignment and Quantification of Protein Signals in Two-Dimensional Western Blotting. Journal of Proteome Research 2020;19(6):2379-2390. DOI: 10.1021/acs.jproteome.0c00061

Bonar E., Chlebicka K., Dubin G., Wladyka B. (2020) Application of Two-Dimensional Difference Gel Electrophoresis in Identification of Factors Responsible for Virulence of Staphylococcus aureus. In: Ji Y. (eds) Methicillin-Resistant Staphylococcus Aureus (MRSA) Protocols. Methods in Molecular Biology, vol 2069. Humana, New York, NY. https://doi.org/10.1007/978-1-4939-9849-4_11

Hecht-Höger AM, Braun BC, Krause E, et al. Plasma proteomic profiles differ between European and North American myotid bats colonized by Pseudogymnoascus destructans. Mol Ecol. 2020;29(9):1745‐1755. doi:10.1111/mec.15437

Gemoll T, Rozanova S, Röder C, et al. Protein Profiling of Serum Extracellular Vesicles Reveals Qualitative and Quantitative Differences After Differential Ultracentrifugation and ExoQuick^TM Isolation. J Clin Med. 2020;9(5):E1429. Published 2020 May 12. doi:10.3390/jcm9051429

Boehm M, Herzog R, Klinglmüller F, Lichtenauer AM, Wagner A, Unterwurzacher M, Beelen RHJ, Alper SL, Aufricht C, Kratochwill K (2019). The Peritoneal Surface Proteome in a Model of Chronic Peritoneal Dialysis Reveals Mechanisms of Membrane Damage and Preservation. Front Physiol. 2019; 10: 472.

Kurpińska A, Suraj J, Bonar E, Zakrzewska A, Stojak M, Sternak M, Jasztal A, Walczak M. Proteomic characterization of early lung response to breast cancer metastasis in mice. Experimental and Molecular Pathology 2019; 107: 129-140.

Fragkostefanakis, S, Simm, S, El‐Shershaby, A, et al. The repressor and co‐activator HsfB1 regulates the major heat stress transcription factors in tomato. Plant Cell Environ. 2019; 42: 874– 890. https://doi.org/10.1111/pce.13434

Hecht-Höger A (2019). Development and application of novel immunological approaches to chiropteran immunology. Dissertation.

Strohkamp S, Gemoll T, Humborg S, Hartwig S, Lehr S, Freitag-Wolf S, Becker S, Franzén B, Pries R, Wollenberg B, Roblick UJ, Bruch HP, Keck T, Auer G, Habermann JK (2018). Protein levels of clusterin and glutathione synthetase in platelets allow for early detection of colorectal cancer. Cell Mol Life Sci. 2018 Jan;75(2):323-334.

Sühling M, Wolke C, Scharf C, Lendeckel U (2018). Proteomics and transcriptomics in atrial fibrillation. Herzschrittmacherther Elektrophysiol. 2018 Mar;29(1):70-75.

Chilukoti RK, Lendeckel J, Darm K, Bukowska A, Goette A, Sühling M, Utpatel K, Peters B, Homuth G, Völker U, Wolke C, Scharf C, Lendeckel U (2018). Integration of “omics” techniques: Dronedarone affects cardiac remodeling in the infarction border zone. Exp Biol Med (Maywood). 2018 Jul; 243(11): 895–910.

Monoyios A, Hummel K, Nöbauer K, Patzl M, Schlosser S, Hess M, Bilic I (2018). An Alliance of Gel-Based and Gel-Free Proteomic Techniques Displays Substantial Insight Into the Proteome of a Virulent and an Attenuated Histomonas meleagridis Strain. Front Cell Infect Microbiol. 2018; 8: 407.

Bonar EA, Bukowski M, Hydzik M, et al. Joint Genomic and Proteomic Analysis Identifies Meta-Trait Characteristics of Virulent and Non-virulent Staphylococcus aureus Strains. Front Cell Infect Microbiol. 2018;8:313. Published 2018 Sep 6. doi:10.3389/fcimb.2018.00313

Lennicke C, Rahn J, Bukur J, Hochgräfe F, Wessjohann LA, Lichtenfels R, Seliger B (2017). Modulation of MHC class I surface expression in B16F10 melanoma cells by methylseleninic acid. Oncoimmuncology. 2017; 6(6): e1259049.

Batista R, Fonseca C, Planchon S, Negrão S, Renaut J, Oliveira MM. Environmental stress is the major cause of transcriptomic and proteomic changes in GM and non-GM plants. Sci Rep. 2017;7(1):10624. Published 2017 Sep 6. doi:10.1038/s41598-017-09646-8

Strohkamp S, Gemoll T, Habermann JK (2016). Possibilities and limitations of 2DE-based analyses for identifying low-abundant tumor markers in human serum and plasma. Proteomics 16: 2519–2532.

Gérin S, Leprince P, Sluse FE, Franck F, Mathy G. New Features on the Environmental Regulation of Metabolism Revealed by Modeling the Cellular Proteomic Adaptations Induced by Light, Carbon, and Inorganic Nitrogen in Chlamydomonas reinhardtii. Front Plant Sci. 2016;7:1158. Published 2016 Aug 9. doi:10.3389/fpls.2016.01158

Dekker L, Arsène-Ploetze F, Santini JM. Comparative proteomics of Acidithiobacillus ferrooxidans grown in the presence and absence of uranium. Res Microbiol. 2016;167(3):234-239. doi:10.1016/j.resmic.2016.01.007

Hanneken M, Šlais K, König S. pI-Control in Comparative Fluorescence Gel Electrophoresis (CoFGE) using amphoteric azo dyes. Data Brief. 2015;3:221-228. Published 2015 Apr 1. doi:10.1016/j.dib.2015.03.007

El Rabey HA, Al-Malki AL, Abulnaja KO, Rohde W. Proteome Analysis for Understanding Abiotic Stress (Salinity and Drought) Tolerance in Date Palm (Phoenix dactylifera L.). Int J Genomics. 2015;2015:407165. doi:10.1155/2015/407165

Tesei D, Marzban G, Marchetti-Deschmann M, Tafer  H, Arcalis E, Sterflinger K (2015). Proteome of tolerance fine-tuning in the human pathogen black yeast Exophiala dermatitidis. Journal of Proteomics 128: 39–57.

Kühne H, Schutkowski A, Weinholz S, et al. Vitamin D receptor regulates intestinal proteins involved in cell proliferation, migration and stress response. Lipids Health Dis. 2014;13:51. Published 2014 Mar 19. doi:10.1186/1476-511X-13-51

Zadražnik T, Hollung K, Egge-Jacobsen W, Meglič V, Šuštar-Vozlič J (2013): Differential proteomic analysis of drought stress response in leaves of common bean (Phaseolus vulgaris L.). Journal of Proteomics 78: 254-272.

Hollmann M, Miller I, Hummel K, et al. Downregulation of cellular protective factors of rumen epithelium in goats fed high energy diet. PLoS One. 2013;8(12):e81602. Published 2013 Dec 9. doi:10.1371/journal.pone.0081602

Pickering C, Ericson M, Söderpalm B. Chronic phencyclidine increases synapsin-1 and synaptic adaptation proteins in the medial prefrontal cortex. ISRN Psychiatry. 2013;2013:620361. Published 2013 Feb 19. doi:10.1155/2013/620361

Labbus K, Henning M, Borkham-Kamphorst E, et al. Proteomic profiling in Lipocalin 2 deficient mice under normal and inflammatory conditions. J Proteomics. 2013;78:188-196. doi:10.1016/j.jprot.2012.11.021

Philipp S (2012): Proteomische Analyse der Zellmembran humaner Erythrozyten als Wirtszellen des Malariaerregers Plasmodium falciparum. Dissertation

Mückschel B, Simon O, Klebensberger J, et al. Ethylene glycol metabolism by Pseudomonas putida. Appl Environ Microbiol. 2012;78(24):8531-8539. doi:10.1128/AEM.02062-12

Westman JO, Taherzadeh MJ, Franzén CJ (2012): Proteomic Analysis of the Increased Stress Tolerance of Saccharomyces cerevisiae Encapsulated in Liquid Core Alginate-Chitosan Capsules. PLoS ONE 7(11): e49335.

Fonseca C, Planchon S, Serra T, Chandler S, Saibo N, Renaut J, Oliveira MM, Batista R (2012): Selection of the best comparator for the risk assessment of GM plants – conventional counterparts vs. negative segregant. Poster presentation

Gemoll T, Laubert T, Grimme C, Roblick UJ, Habermann JK (2012): Hochauflösende 2D- Gelelektrophorese von Knochengewebsproben. Biospektrum 18 (5): 520-521.

May C, Brosseron F, Chartowski P, Meyer HE, Marcus K (2012): Differential proteome analysis using 2D-DIGE. Quantitative methods in Proteomics.  Methods in Molecular Biology 893 (2): 75-82.

Bjarnadóttir SG, Hollung K, Høy M, Bendixen E, Codrea MC, Veiseth-Kent E (2012): Changes in protein abundance between tender and tough meat from bovine Longissimus thoracis muscle assessed by iTRAQ and 2-DE analysis. Journal of Animal Science 90(6): 2035-2043.

Grimme C, Gemoll T, Habermann J, Seide K, Gerlach UJ (2012): Analysis of protein for the diagnosis of osteitis/osteomyelitis: Initial results. Trauma und Berufskrankheit 14(1): 5-7.

Smalla KH, Wyneken U (2011):Two-Dimensional Gel Electrophoresis-Based Proteomic Analysis of Brain Synapses. Neuroproteomics 57(3): 95-113.

Barthel A (2010). Protein analysis and tissue culture of the sex pheromone gland of Lepidoptera. Diplomarbeit am Max-Planck-Institut für Chemische Ökologie (Jena).

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